BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035G07SP1|AL430113
(963 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1380 1901 0.0
>3x_Contig1380
Length = 6718
Score = 1901 bits (957), Expect = 0.0
Identities = 960/963 (99%)
Strand = Plus / Plus
Query: 1 taaaccaaacttggcacagtatttataagatttgataacgtttcttgaaatttataagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1783 taaaccaaacttggcacagtatttataagatttgataacgtttcttgaaatttataagtt 1842
Query: 61 cgacagacgtgtaaacaacgcttgaacactatcttaaacccctgtgtttaccacaatccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1843 cgacagacgtgtaaacaacgcttgaacactatcttaaacccctgtgtttaccacaatccc 1902
Query: 121 tctttgacattactctttgatatgaattatatattttgaaaatttcgattatccaaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1903 tctttgacattactctttgatatgaattatatattttgaaaatttcgattatccaaggaa 1962
Query: 181 cagaagagtatttactttttttatctcacttcagtatttttacgctagtgagtagtgcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1963 cagaagagtatttactttttttatctcacttcagtatttttacgctagtgagtagtgcat 2022
Query: 241 agctctgagattagcatgccttgctaaagttcttgaaagaggtgaactagttttacacta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2023 agctctgagattagcatgccttgctaaagttcttgaaagaggtgaactagttttacacta 2082
Query: 301 cgatttggaatgacaaatgagttaaaagtagaaggtacaaagaacaacccatcatcaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2083 cgatttggaatgacaaatgagttaaaagtagaaggtacaaagaacaacccatcatcaaga 2142
Query: 361 cgaaagcragatgagttccattatttgaagagtctagtgcattttatttttttttatata 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2143 cgaaagcaagatgagttccattatttgaagagtctagtgcattttatttttttttatata 2202
Query: 421 tgcractgtctcctacttttgtgacttagaacaggctgttcactatgataaattgtgtta 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2203 tgcaactgtctcctacttttgtgacttagaacaggctgttcactatgataaattgtgtta 2262
Query: 481 cacttttctaagtccttagtcacattatacggttattgatcacgtggttttataaaaagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2263 cacttttctaagtccttagtcacattatacggttattgatcacgtggttttataaaaagg 2322
Query: 541 cattccctccatccctcctcgcagttttctttccaacccgaaatagatccccattttccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2323 cattccctccatccctcctcgcagttttctttccaacccgaaatagatccccattttccc 2382
Query: 601 ctcgatgctctgtttcgagacccatttgatgaagtattatataatarcgattcccaattt 660
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2383 ctcgatgctctgtttcgagacccatttgatgaagtattatataataacgattcccaattt 2442
Query: 661 ggcaaaaaggtaaacataccggatgggaaaaaaaacacatctacatcacatagccatgta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2443 ggcaaaaaggtaaacataccggatgggaaaaaaaacacatctacatcacatagccatgta 2502
Query: 721 ccgagaaagtctctacatatgctttgaaacatatggaactgtgagggacgttcttcttat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2503 ccgagaaagtctctacatatgctttgaaacatatggaactgtgagggacgttcttcttat 2562
Query: 781 ttaaaatatcttcatcaaaaactacctcgtagcaagggtctttggtttttaagtggctac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2563 ttaaaatatcttcatcaaaaactacctcgtagcaagggtctttggtttttaagtggctac 2622
Query: 841 gtttattaaacgtttaggtaccagaatagcagactcagtcgtccaagcatcaccacgaac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2623 gtttattaaacgtttaggtaccagaatagcagactcagtcgtccaagcatcaccacgaac 2682
Query: 901 tcttcagagttggtagacagtagtaggaaagagagtgtgtgttttattctgcgcatttga 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2683 tcttcagagttggtagacagtagtaggaaagagagtgtgtgttttattctgcgcatttga 2742
Query: 961 gac 963
|||
Sbjct: 2743 gac 2745
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8856
Number of Sequences: 1807
Number of extensions: 8856
Number of successful extensions: 91
Number of sequences better than 1.0e-20: 1
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)